WebOnly output alignments with number of CIGAR bases consuming query sequence ≥ INT [0] -e STR, --expr STR. Only include alignments that match the filter expression STR . The syntax for these expressions is described in the main samtools (1) man page under the FILTER EXPRESSIONS heading. -f FLAG, --require-flags FLAG. http://broadinstitute.github.io/picard/javadoc/picard/picard/sam/DuplicationMetrics.html
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